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ATCC t vincentii
Circular genome representations of three proposed species: A. “ T. <t>vincentii</t> ” OMZ 800, B. Treponema sp. OMZ 806, and C. Treponema sp. OMZ 838. The plots, generated using Proskee, show the characteristic features of each genome from the outside to the inner of the circle. The rings represent GC skew, CDSs, tRNAs, repeat regions, and GC content, are indicated by color coding.

Circular genome representations of three proposed species: A. “ T. <t>vincentii</t> ” OMZ 800, B. Treponema sp. OMZ 806, and C. Treponema sp. OMZ 838. The plots, generated using Proskee, show the characteristic features of each genome from the outside to the inner of the circle. The rings represent GC skew, CDSs, tRNAs, repeat regions, and GC content, are indicated by color coding.

T Vincentii, supplied by ATCC, used in various techniques. Bioz Stars score: 94/100, based on 82 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/t+vincentii/Treponema+vincentii+(ex+Brumpt)+Smibert/pmc12781046-21-8-11
Average 94 stars, based on 82 article reviews

t vincentii - by Bioz Stars, 2026-09

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1) Product Images from "Genomic Insights Into the Treponema Genus: Taxonomic Resolution of Treponema vincentii and Description of Two Novel Species, Treponema plautii sp. nov. and Treponema sinense sp. nov."

Journal: Molecular Oral Microbiology

doi: 10.1111/omi.70009

Circular genome representations of three proposed species: A. “ T. vincentii ” OMZ 800, B. Treponema sp. OMZ 806, and C. Treponema sp. OMZ 838. The plots, generated using Proskee, show the characteristic features of each genome from the outside to the inner of the circle. The rings represent GC skew, CDSs, tRNAs, repeat regions, and GC content, are indicated by color coding.

Figure Legend Snippet: Circular genome representations of three proposed species: A. “ T. vincentii ” OMZ 800, B. Treponema sp. OMZ 806, and C. Treponema sp. OMZ 838. The plots, generated using Proskee, show the characteristic features of each genome from the outside to the inner of the circle. The rings represent GC skew, CDSs, tRNAs, repeat regions, and GC content, are indicated by color coding.

Techniques Used: Generated

Phylogenetic tree based on 16S rDNA sequence of “ T. vincentii ” OMZ 800, Treponema sp. OMZ 806, and Treponema sp. OMZ 838, along with all currently recognized species of the genus Treponema . The evolutionary history was inferred using the Maximum Likelihood method and the Tamura‐Nei model. The percentage of trees in which the associated taxa clustered together is shown next to the branches (bootstrap support). The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 30 nucleotide sequences. The strains studied in this work are highlighted in bold. Evolutionary analyses were conducted in MEGA11. The 16S rDNA sequences of “ T. vincentii ” OMZ 800, Treponema sp. OMZ 806, and Treponema sp. OMZ 838 were extracted from their respective genomes. Details of the studied strains and their accession numbers are provided in Table .

Figure Legend Snippet: Phylogenetic tree based on 16S rDNA sequence of “ T. vincentii ” OMZ 800, Treponema sp. OMZ 806, and Treponema sp. OMZ 838, along with all currently recognized species of the genus Treponema . The evolutionary history was inferred using the Maximum Likelihood method and the Tamura‐Nei model. The percentage of trees in which the associated taxa clustered together is shown next to the branches (bootstrap support). The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 30 nucleotide sequences. The strains studied in this work are highlighted in bold. Evolutionary analyses were conducted in MEGA11. The 16S rDNA sequences of “ T. vincentii ” OMZ 800, Treponema sp. OMZ 806, and Treponema sp. OMZ 838 were extracted from their respective genomes. Details of the studied strains and their accession numbers are provided in Table .

Techniques Used: Sequencing

TYGS‐generated phylogenetic tree illustrating the relationships between strains “ T. vincentii ” OMZ 800, Treponema sp. OMZ 806, and Treponema sp. OMZ 838, along with related type strains and non‐validated Treponema isolates. The numerical values above the branches represent GBDP pseudo‐bootstrap support values exceeding 60% from 100 replications. Leaf labels are annotated with species and subspecies clusters, genomic GC content, δ values, overall genome size, and number of proteins.

Figure Legend Snippet: TYGS‐generated phylogenetic tree illustrating the relationships between strains “ T. vincentii ” OMZ 800, Treponema sp. OMZ 806, and Treponema sp. OMZ 838, along with related type strains and non‐validated Treponema isolates. The numerical values above the branches represent GBDP pseudo‐bootstrap support values exceeding 60% from 100 replications. Leaf labels are annotated with species and subspecies clusters, genomic GC content, δ values, overall genome size, and number of proteins.

Techniques Used: Generated

Functional annotation summary of T. vincentii (OMZ 800 T ; F0403; ATCC 35580), T. plautii (OMZ 806 T ; OMZ 305), and T. sinense (OMZ 838 T ; OMZ 855; OMZ 857). After gene calling, the RAST server assigned protein‐coding genes to 24 metabolic pathways via the subsystem technology.

Figure Legend Snippet: Functional annotation summary of T. vincentii (OMZ 800 T ; F0403; ATCC 35580), T. plautii (OMZ 806 T ; OMZ 305), and T. sinense (OMZ 838 T ; OMZ 855; OMZ 857). After gene calling, the RAST server assigned protein‐coding genes to 24 metabolic pathways via the subsystem technology.

Techniques Used: Functional Assay

other:

Article Title: Genomic Insights Into the Treponema Genus: Taxonomic Resolution of Treponema vincentii and Description of Two Novel Species, Treponema plautii sp. nov. and Treponema sinense sp. nov.
Article Snippet: Strains of “ T. vincentii ” OMZ 800 (ATCC 700765, DSMZ 16788), Treponema sp. OMZ 806 (ATCC 700767, DSMZ 16787), and Treponema sp. OMZ 838 (ATCC 700772, DSMZ 16789) was purchased from the Leibniz Institute DSMZ.

Article Title: Genomic Insights Into the Treponema Genus: Taxonomic Resolution of Treponema vincentii and Description of Two Novel Species, Treponema plautii sp. nov. and Treponema sinense sp. nov.
Article Snippet: Query strain Subject strain ANI % dDDH (d4, in %)a “T. vincentii” OMZ 800 “T. vincentii” ATCC 35580 97.9 80 “T. vincentii” F0403 97.8 80.2 Treponema sp. OMZ 838 85.9 30.7 T. medium ATCC 700293T 85.7 30.8 Treponema sp. OMZ 806 85.5 30.3 Treponema sp. IA OMZ 855 85.5 30.7 Treponema sp. OMZ 305 85.5 30.3 T. maltophilum ATCC 51939T 68.6 31.3 T. putidum OMZ 758T 68.2 26.5 T. denticola ATCC 35405T 68.1 24.2 Treponema sp. OMZ 806 Treponema sp. OMZ 305 96.4 70.2 T. medium ATCC 700293T 91.7 44.1 Treponema sp. OMZ 855 89.9 38.5 Treponema sp. OMZ 838 89.8 38.8 Treponema sp. OMZ 857 89.7 38.4 “T. vincentii” OMZ 800 85.5 30.3 “T. vincentii” ATCC 35580 85.4 30 “T. vincentii” F0403 85.3 30.1 T. denticola ATCC 35405T 69.5 31.1 T. maltophilum ATCC 51939T 69.1 34.9 Treponema sp. OMZ 838 Treponema sp. OMZ855 98.1 81.6 Treponema sp. OMZ857 97 72.2 T. medium ATCC 700293T 90.9 42.1 Treponema sp. OMZ 806 89.8 38.8 Treponema sp. OMZ305 89.8 38.7 “T. vincentii” F0403 85.8 31.3 “T. vincentii” ATCC 35580 85.8 31 “T. vincentii” OMZ 800 85.7 30.7 T.maltophilum ATCC 51939T 69.7 39.1 T. denticola ATCC 35405T 69.7 31 aThe computations are based on dDDH formula d4 which is equivalent to GGDC formula 2.

Article Title: Genomic Insights Into the Treponema Genus: Taxonomic Resolution of Treponema vincentii and Description of Two Novel Species, Treponema plautii sp. nov. and Treponema sinense sp. nov.
Article Snippet: Strains of “T. vincentii” OMZ 800 (ATCC 700765, DSMZ 16788), Treponema sp. OMZ 806 (ATCC 700767, DSMZ 16787), and Treponema sp. OMZ 838 (ATCC 700772, DSMZ 16789) was purchased from the Leibniz Institute DSMZ.

Polymerase Chain Reaction:

Article Title: Bacterial species associated with interdigital phlegmon outbreaks in Finnish dairy herds
Article Snippet: PCR products were separated on a 2% E-gel (Invitrogen, Carlsbad, 92,008 CA, USA), and visualized by UV fluorescence. .. The following type strains were used as controls in the PCR assays: D. nodosus ATCC 25549, F. necrophorum ssp. necrophorum ATCC 25286, F. varium ATCC 8501, F. necrophorum ssp. funduliforme DSM 19678, T. pyogenes ATCC 19411D, P. levii (DSM23370) and P. melaninogenica (DSM26980), T. vincentii (ATCC 35580), T. phagedenis (ATCC 27087) and T. denticola (ATCC 3320). ..

Functional Assay:

Article Title: Genomic Insights Into the Treponema Genus: Taxonomic Resolution of Treponema vincentii and Description of Two Novel Species, Treponema plautii sp. nov. and Treponema sinense sp. nov.
Article Snippet: .. See the T erm s and C onditions (https://onlinelibrary.w iley.com /term s-and-conditions) on W iley O nline L ibrary for rules of use; O A articles are governed by the applicable C reative C om m ons L icense FIGURE 4 Functional annotation summary of T. vincentii (OMZ 800T; F0403; ATCC 35580), T. plautii (OMZ 806T; OMZ 305), and T. sinense (OMZ 838T; OMZ 855; OMZ 857). ..

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